Mr Vickers
 

I grounded out the altinator on my 2009 Honda civic lx and now the fuel is not getting to the fuel rail what did I do when I grounded it out

The alternator is connected to the ECM which basically controls all of the engine functions.
You may have blown out one of the most expensive engine parts.
But, lets not get ahead of ourselves here.
First check to see if any fuses are blown
Pull each one out and look at it then re-insert one by one.
Check both the engine bay fuse box and the under dash fuse box