I just bought a 2007 Honda Accord 2.4 recently and I immediately replaced the battery and did an oil change the first day. After putting in a new battery, my passenger and both rear windows did not work, only my driver's side window and sun roof worked. When using the buttons on the driver's side door, there was a click sound, but not when using the window buttons on the other doors. The next week, I had the battery out for a few hours to replace a new ETC sensor and knock sensor. So when I was done and put the battery back in, all my windows started working again! Now just a few days ago I had the battery back out to replace another sensor and when I put the battery back in, those 3 same windows stopped working...again. I tried to replicate what I did the first time when they started working but no luck. I also did the reset procedure for Hondas and still nothing. Please help!!!

 

Take the battery back out again.
Seriously. I think I would look for a ground wire that attaches to the inner fender right by where the battery is. Clean that good.